Others titles

  • NARMS Animal Isolates Veterinary Antibiotics
  • NARMS Animal Isolates Antibacterial Resistance
  • NARMS Animal Isolates Antimicrobial Medicines
  • NARMS Animal Isolates Anti Microbial

Keywords

  • Veterinary Antibiotics
  • Antibacterial Resistance
  • Antimicrobial Medicines
  • Anti Microbial Drugs
  • Animal Isolates
  • Diagnostic Animal Specimens
  • Antimicrobial Resistance

NARMS Food Animal Isolate Data

The National Antimicrobial Resistance Monitoring System (NARMS) Animal Isolates provides data that comprises the testing of isolates obtained from diagnostic animal specimens, healthy on-farm animals, and food-producing animals at slaughter. These tests on retail samples were performed by FDA.

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Description

In an effort to prospectively monitor the occurrence of antimicrobial resistance of zoonotic pathogens from human diagnostic specimens, retail meats and food animals, the National Antimicrobial Resistance Monitoring System (NARMS) was established in 1996 by the Food and Drug Administration’s Center for Veterinary Medicine in collaboration with the Centers for Disease Control and Prevention (CDC), and the United States Department of Agriculture (USDA).

The animal component of NARMS is housed within the Bacterial Epidemiology and Antimicrobial Resistance Research Unit (BEAR) of the Agricultural Research Service (ARS) in Athens, Georgia. The animal component of NARMS comprises the testing of isolates obtained from diagnostic animal specimens, healthy on-farm animals, and food-producing animals at slaughter. The panel of antimicrobial agents chosen is representative of common antimicrobials used in both human and veterinary medicine. Non-typhoid Salmonella was chosen as a sentinel organism of the animal component of NARMS which was launched in 1997. Testing of Campylobacter isolates began in 1998 while Escherichia coli and Enterococcus were included in 2000.

The goals and objectives of the monitoring program are to:
1. Monitor trends in antimicrobial resistance among foodborne bacteria from humans, retail meats, and animals
2. Disseminate timely information on antimicrobial resistance to promote interventions that reduce resistance among foodborne bacteria
3. Conduct research to better understand the emergence, persistence, and spread of antimicrobial resistance
4. Assist the FDA in making decisions related to the approval of safe and effective antimicrobial drugs for animals

About this Dataset

Data Info

Date Created

1997

Last Modified

2022-04-19

Version

2022-04-19

Update Frequency

Annual

Temporal Coverage

1997 - 2005

Spatial Coverage

United States

Source

John Snow Labs; Centers of Disease Control and Prevention (CDC), FDA’s Center for Veterinary Medicine (FDA), U.S. Department of Agriculture (USDA);

Source License URL

Source License Requirements

N/A

Source Citation

N/A

Keywords

Veterinary Antibiotics, Antibacterial Resistance, Antimicrobial Medicines, Anti Microbial Drugs, Animal Isolates, Diagnostic Animal Specimens, Antimicrobial Resistance

Other Titles

NARMS Animal Isolates Veterinary Antibiotics, NARMS Animal Isolates Antibacterial Resistance, NARMS Animal Isolates Antimicrobial Medicines, NARMS Animal Isolates Anti Microbial

Data Fields

Name Description Type Constraints
Sample_idA code that uniquely identifies a bacteria isolate. The code may be broken down into state, year, month, source type, and sequence.stringrequired : 1
Genus_of_Bacterial_IsolateValue: Salmonella, Campylobacter, Shigella, Escherichiastringrequired : 1
Species_of_Bacterial_IsolateEither the specific species name of the genus found in this isolate or a grouping such as "Other" for reporting purposes.string-
Serotype_of_Bacterial_IsolateEither the specific serotype name found in this isolate or a grouping such as "Other" for reporting purposes.string-
Year_of_Sample_CollectionThe year in which the sample was collected.date-
Acquisition_DateThe date that the sample was collected.date-
Host_SpeciesThe name of the host species that was the source of the sample. Valid values are: Humans, Chickens, Turkeys, Cattle, and Swine.stringrequired : 1
Amoxicillin_Clavulanic_Acid_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Amoxicillin-Clavulanic acid)string-
Amoxicillin_Clavulanic_Acid_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Amoxicillin-Clavulanic acid)numberlevel : Ratio
Amikacin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Amikacin)string-
Amikacin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus.(Amikacin)numberlevel : Ratio
Ampicillin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Ampicillin)string-
Ampicillin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus.(Ampicillin)integerlevel : Ratio
Apramycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Apramycin)string-
Apramycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus.(Apramycin)numberlevel : Ratio
Ceftriaxone_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Ceftriaxone)string-
Ceftriaxone_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Ceftriaxone)numberlevel : Ratio
Azithromycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Azithromycin)string-
Azithromycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Azithromycin)numberlevel : Ratio
Cephalothin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Cephalothin)string-
Cephalothin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Cephalothin)integerlevel : Ratio
Chloramphenicol_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Chloramphenicol)string-
Chloramphenicol_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Chloramphenicol)numberlevel : Ratio
Ciprofloxacin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Ciprofloxacin)string-
Ciprofloxacin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Ciprofloxacin)numberlevel : Ratio
Clindamycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Clindamycin)string-
Clindamycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Clindamycin)numberlevel : Ratio
Trimethoprim_Sulfamethoxazole_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Trimethoprim-Sulfamethoxazole)string-
Trimethoprim_Sulfamethoxazole_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Trimethoprim-Sulfamethoxazole)numberlevel : Ratio
Daptomycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Daptomycin)string-
Daptomycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Daptomycin)numberlevel : Ratio
Erythromycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Erythromycin)string-
Erythromycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Erythromycin)numberlevel : Ratio
Florfenicol_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Florfenicol)string-
Florfenicol_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Florfenicol)numberlevel : Ratio
Sulfisoxazole_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Sulfisoxazole)string-
Sulfisoxazole_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Sulfisoxazole)integerlevel : Ratio
Cefoxitin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Cefoxitin)string-
Cefoxitin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Cefoxitin)numberlevel : Ratio
Gentamicin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Gentamicin)string-
Gentamicin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Gentamicin)numberlevel : Ratio
Imipenem_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Imipenem)string-
Imipenem_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Imipenem)numberlevel : Ratio
Kanamycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Kanamycin)string-
Kanamycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Kanamycin)integerlevel : Ratio
Lincomycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Lincomycin)string-
Lincomycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Lincomycin)integerlevel : Ratio
Linezolid_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Linezolid)string-
Linezolid_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Linezolid)numberlevel : Ratio
Nalidixic_Acid_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Nalidixic Acid)string-
Nalidixic_Acid_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Nalidixic Acid)numberlevel : Ratio
Nitrofurantoin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Nitrofurantoin)string-
Nitrofurantoin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Nitrofurantoin)integerlevel : Ratio
Penicillin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Penicillin)string-
Penicillin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Penicillin)numberlevel : Ratio
Quinupristin_Dalfopristin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Quinupristin-Dalfopristin)string-
Quinupristin_Dalfopristin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Quinupristin-Dalfopristin)numberlevel : Ratio
Sulfamethoxazole_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Sulfamethoxazole)string-
Sulfamethoxazole_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Sulfamethoxazole)integerlevel : Ratio
Streptomycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Streptomycin)string-
Streptomycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Streptomycin)integerlevel : Ratio
Telithromcyin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Telithromcyin)string-
Telithromcyin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Telithromcyin)numberlevel : Ratio
Tetracycline_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Tetracycline)string-
Tetracycline_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Tetracycline)numberlevel : Ratio
Tigecycline_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Tigecycline)string-
Tigecycline_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Tigecycline)numberlevel : Ratio
Ceftiofur_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Ceftiofur)string-
Ceftiofur_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Ceftiofur)numberlevel : Ratio
Tylosin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Tylosin)string-
Tylosin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Tylosin)numberlevel : Ratio
Vancomycin_OperatorAn operator that when used in conjunction with the given concentration indicates the MIC for this drug genus combination. Valid values are: <, <=, =, >=, > . (Vancomycin)string-
Vancomycin_ConcentrationThe given concentration that when used in conjunction with the operator indicates the MIC for this isolate and bacteria genus. (Vancomycin)numberlevel : Ratio

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Sample idGenus of Bacterial IsolateSpecies of Bacterial IsolateSerotype of Bacterial IsolateYear of Sample CollectionAcquisition DateHost SpeciesAmoxicillin Clavulanic Acid OperatorAmoxicillin Clavulanic Acid ConcentrationAmikacin OperatorAmikacin ConcentrationAmpicillin OperatorAmpicillin ConcentrationApramycin OperatorApramycin ConcentrationCeftriaxone OperatorCeftriaxone ConcentrationAzithromycin OperatorAzithromycin ConcentrationCephalothin OperatorCephalothin ConcentrationChloramphenicol OperatorChloramphenicol ConcentrationCiprofloxacin OperatorCiprofloxacin ConcentrationClindamycin OperatorClindamycin ConcentrationTrimethoprim Sulfamethoxazole OperatorTrimethoprim Sulfamethoxazole ConcentrationDaptomycin OperatorDaptomycin ConcentrationErythromycin OperatorErythromycin ConcentrationFlorfenicol OperatorFlorfenicol ConcentrationSulfisoxazole OperatorSulfisoxazole ConcentrationCefoxitin OperatorCefoxitin ConcentrationGentamicin OperatorGentamicin ConcentrationImipenem OperatorImipenem ConcentrationKanamycin OperatorKanamycin ConcentrationLincomycin OperatorLincomycin ConcentrationLinezolid OperatorLinezolid ConcentrationNalidixic Acid OperatorNalidixic Acid ConcentrationNitrofurantoin OperatorNitrofurantoin ConcentrationPenicillin OperatorPenicillin ConcentrationQuinupristin Dalfopristin OperatorQuinupristin Dalfopristin ConcentrationSulfamethoxazole OperatorSulfamethoxazole ConcentrationStreptomycin OperatorStreptomycin ConcentrationTelithromcyin OperatorTelithromcyin ConcentrationTetracycline OperatorTetracycline ConcentrationTigecycline OperatorTigecycline ConcentrationCeftiofur OperatorCeftiofur ConcentrationTylosin OperatorTylosin ConcentrationVancomycin OperatorVancomycin Concentration
BEAR002139Cjejuni2001Chickens=0.047=1.0=0.064=0.125=0.25=0.38=4=0.5
BEAR002140Ccoli2001Chickens=0.032=2.0=0.094=0.047=0.25=0.38=12=256.0
BEAR002141Ccoli2001Chickens=0.125=2.0=0.064=0.25=1.0=0.38=8=256.0
BEAR002142Ccoli2001Chickens=0.047=1.0=0.094=0.047=0.125=0.19=8=256.0
BEAR002143Ccoli2001Chickens=0.023=0.75=0.047=0.047=0.19=0.19=6=256.0
BEAR002144Cjejuni2001Chickens=0.047=1.5=32.0=0.125=0.19=0.125=256=256.0
BEAR002145Cjejuni2001Chickens=0.047=0.75=0.047=0.125=0.19=0.75=3=0.25
BEAR002146Cjejuni2001Chickens=0.094=1.0=0.125=0.25=0.25=0.5=3=0.38
BEAR002147Cjejuni2001Chickens=0.125=2.0=32.0=0.125=0.25=0.19=256=256.0
BEAR002148Ccoli2001Chickens=0.094=2.0=0.125=0.19=1.5=1.0=8=1.0